BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G02SP1|AL430274
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1816 0.0
>3x_Contig1555
Length = 10828
Score = 1816 bits (915), Expect = 0.0
Identities = 926/930 (99%), Gaps = 1/930 (0%)
Strand = Plus / Minus
Query: 1 gatccgtcgtcgtggtgtcttatgccccaatcgatttcactcctgaggtgtctcaggctt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5596 gatccgtcgtcgtgg-gtcttatgccccaatcgatttcactcctgaggtgtctcaggctt 5538
Query: 61 gccgcaaacaagtggaattctacttcagtgaatataatttgccctackataaatttttac 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5537 gccgcaaacaagtggaattctacttcagtgaatataatttgccctacgataaatttttac 5478
Query: 121 gctctctatgcgaacagaatgacggatggattccaattacgacacttgcgtctttcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5477 gctctctatgcgaacagaatgacggatggattccaattacgacacttgcgtctttcaaca 5418
Query: 181 gaatgaaaaagtatagacctgtcgacaaagttgttgattgtttaaaggactcgacgattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5417 gaatgaaaaagtatagacctgtcgacaaagttgttgattgtttaaaggactcgacgattc 5358
Query: 241 tagaggttagcgctgatggtgaaaatgtgcgtagaaagagtccattagagacagttgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5357 tagaggttagcgctgatggtgaaaatgtgcgtagaaagagtccattagagacagttgatt 5298
Query: 301 ttaaggacaggaacgaaagagtgttagtgtttatgaactttaagaagatcgaaaatgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5297 ttaaggacaggaacgaaagagtgttagtgtttatgaactttaagaagatcgaaaatgaag 5238
Query: 361 ataaagataaattcctagaattacaagaagaactagagaagttcttcaatgggttcacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5237 ataaagataaattcctagaattacaagaagaactagagaagttcttcaatgggttcacca 5178
Query: 421 ctgttaaccaagttcgtttgaagaaggaccataaganatacttcaacggtgttgtcgaag 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5177 ctgttaaccaagttcgtttgaagaaggaccataagaaatacttcaacggtgttgtcgaag 5118
Query: 481 tcgaattcaagacgaaggaggaatgtgtcaaattctttgaggaacacaagaccgatttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5117 tcgaattcaagacgaaggaggaatgtgtcaaattctttgaggaacacaagaccgatttct 5058
Query: 541 catatcagggacaaccattggaagttgtcactaagaagcaatacagcctcgccaagaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5057 catatcagggacaaccattggaagttgtcactaagaagcaatacagcctcgccaagaatg 4998
Query: 601 caactagatcaaagaatttcggtggttctggtcaaaagacaagatcattaactggttaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4997 caactagatcaaagaatttcggtggttctggtcaaaagacaagatcattaactggttaca 4938
Query: 661 ggaagaacatcccaaagactaatgacgaaactcctgaagccagttctgaatcaaagctca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4937 ggaagaacatcccaaagactaatgacgaaactcctgaagccagttctgaatcaaagctca 4878
Query: 721 gtgaaggagatgccaatgctccaactgagaagaaatcggaagaaagtgccacagaaactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4877 gtgaaggagatgccaatgctccaactgagaagaaatcggaagaaagtgccacagaaactg 4818
Query: 781 cttaaggcagtccgggctattctcatattgttattctaaagctcttttttccggtgtcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 cttaaggcagtccgggctattctcatattgttattctaaagctcttttttccggtgtcaa 4758
Query: 841 tcgaactctttgccagtaaattgtaagaggatggataccaatggaatctccaagaaaaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4757 tcgaactctttgccagtaaattgtaagaggatggataccaatggaatctccaagaaaaga 4698
Query: 901 ggtttaamgaaataataaatacacacactt 930
||||||| ||||||||||||||||||||||
Sbjct: 4697 ggtttaacgaaataataaatacacacactt 4668
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6973
Number of Sequences: 1807
Number of extensions: 6973
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)